Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubqln1Q8R317 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ubqln1Q8R317 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ubqln1Q8R317 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ubqln1Q8R317 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ubqln1Q8R317 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubqln1Q8R317 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubqln1Q8R317 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubqln1Q8R317 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubqln1Q8R317 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubqln1Q8R317 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubqln1Q8R317 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ubqln1Q8R317 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubqln1Q8R317 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.18■□□□□ 0.82
Ubqln1Q8R317 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln1Q8R317 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.18■□□□□ 0.82
Ubqln1Q8R317 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ubqln1Q8R317 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubqln1Q8R317 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ubqln1Q8R317 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln1Q8R317 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln1Q8R317 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.16■□□□□ 0.82
Ubqln1Q8R317 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.16■□□□□ 0.82
Ubqln1Q8R317 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubqln1Q8R317 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms