Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnot3Q8K0V4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.1■□□□□ 0.81
Cnot3Q8K0V4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cnot3Q8K0V4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cnot3Q8K0V4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.09■□□□□ 0.81
Cnot3Q8K0V4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cnot3Q8K0V4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cnot3Q8K0V4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cnot3Q8K0V4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cnot3Q8K0V4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cnot3Q8K0V4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.08■□□□□ 0.8
Cnot3Q8K0V4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.07■□□□□ 0.8
Cnot3Q8K0V4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnot3Q8K0V4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cnot3Q8K0V4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Cnot3Q8K0V4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Terc-201ENSMUST00000082862 423 ntBASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cnot3Q8K0V4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnot3Q8K0V4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cnot3Q8K0V4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.05■□□□□ 0.8
Cnot3Q8K0V4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.05■□□□□ 0.8
Cnot3Q8K0V4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cnot3Q8K0V4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cnot3Q8K0V4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cnot3Q8K0V4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.04■□□□□ 0.8
Cnot3Q8K0V4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cnot3Q8K0V4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cnot3Q8K0V4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cnot3Q8K0V4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cnot3Q8K0V4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cnot3Q8K0V4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cnot3Q8K0V4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cnot3Q8K0V4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cnot3Q8K0V4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnot3Q8K0V4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cnot3Q8K0V4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cnot3Q8K0V4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cnot3Q8K0V4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cnot3Q8K0V4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cnot3Q8K0V4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cnot3Q8K0V4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms