Protein–RNA interactions for Protein: Q8CCG1

Zc2hc1c, Zinc finger C2HC domain-containing protein 1C, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc2hc1cQ8CCG1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Zc2hc1cQ8CCG1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Zc2hc1cQ8CCG1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm7417-201ENSMUST00000192950 473 ntBASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc2hc1cQ8CCG1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zc2hc1cQ8CCG1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Zc2hc1cQ8CCG1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Zc2hc1cQ8CCG1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zc2hc1cQ8CCG1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Zc2hc1cQ8CCG1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zc2hc1cQ8CCG1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.83■■□□□ 1.09
Zc2hc1cQ8CCG1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zc2hc1cQ8CCG1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Zc2hc1cQ8CCG1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.83■■□□□ 1.09
Zc2hc1cQ8CCG1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.83■■□□□ 1.08
Zc2hc1cQ8CCG1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Zc2hc1cQ8CCG1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc2hc1cQ8CCG1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Zc2hc1cQ8CCG1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.82■■□□□ 1.08
Zc2hc1cQ8CCG1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc2hc1cQ8CCG1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc2hc1cQ8CCG1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.81■■□□□ 1.08
Zc2hc1cQ8CCG1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc2hc1cQ8CCG1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Zc2hc1cQ8CCG1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Gm40881-201ENSMUST00000223397 166 ntBASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Zc2hc1cQ8CCG1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Zc2hc1cQ8CCG1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zc2hc1cQ8CCG1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Zc2hc1cQ8CCG1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Zc2hc1cQ8CCG1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc2hc1cQ8CCG1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc2hc1cQ8CCG1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc2hc1cQ8CCG1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.77■■□□□ 1.08
Zc2hc1cQ8CCG1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc2hc1cQ8CCG1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc2hc1cQ8CCG1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc2hc1cQ8CCG1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc2hc1cQ8CCG1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.76■■□□□ 1.07
Zc2hc1cQ8CCG1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc2hc1cQ8CCG1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms