Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.73■■□□□ 1.07
Ccdc187Q8C5V8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.72■■□□□ 1.07
Ccdc187Q8C5V8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc187Q8C5V8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Gm13241-201ENSMUST00000094493 780 ntBASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc187Q8C5V8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 Gm9847-201ENSMUST00000052528 599 ntBASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc187Q8C5V8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc187Q8C5V8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc187Q8C5V8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc187Q8C5V8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc187Q8C5V8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc187Q8C5V8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc187Q8C5V8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc187Q8C5V8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc187Q8C5V8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc187Q8C5V8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc187Q8C5V8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc187Q8C5V8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc187Q8C5V8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc187Q8C5V8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccdc187Q8C5V8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc187Q8C5V8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc187Q8C5V8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc187Q8C5V8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc187Q8C5V8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc187Q8C5V8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc187Q8C5V8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc187Q8C5V8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc187Q8C5V8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc187Q8C5V8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc187Q8C5V8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc187Q8C5V8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc187Q8C5V8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc187Q8C5V8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc187Q8C5V8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc187Q8C5V8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc187Q8C5V8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc187Q8C5V8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc187Q8C5V8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 Gm12922-201ENSMUST00000120626 809 ntBASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 Gm21956-201ENSMUST00000179946 522 ntBASIC21.6■■□□□ 1.05
Ccdc187Q8C5V8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc187Q8C5V8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc187Q8C5V8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc187Q8C5V8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.58■■□□□ 1.05
Ccdc187Q8C5V8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
Ccdc187Q8C5V8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ccdc187Q8C5V8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.58■■□□□ 1.05
Ccdc187Q8C5V8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc187Q8C5V8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc187Q8C5V8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc187Q8C5V8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc187Q8C5V8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc187Q8C5V8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc187Q8C5V8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc187Q8C5V8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms