Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc43a1Q8BSM7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc43a1Q8BSM7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc43a1Q8BSM7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc43a1Q8BSM7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc43a1Q8BSM7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc43a1Q8BSM7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc43a1Q8BSM7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Slc43a1Q8BSM7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc43a1Q8BSM7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc43a1Q8BSM7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc43a1Q8BSM7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Slc43a1Q8BSM7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slc43a1Q8BSM7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc43a1Q8BSM7 Gm22238-201ENSMUST00000175222 88 ntBASIC21.71■■□□□ 1.07
Slc43a1Q8BSM7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc43a1Q8BSM7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc43a1Q8BSM7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Slc43a1Q8BSM7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Slc43a1Q8BSM7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc43a1Q8BSM7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc43a1Q8BSM7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc43a1Q8BSM7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.68■■□□□ 1.06
Slc43a1Q8BSM7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc43a1Q8BSM7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc43a1Q8BSM7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc43a1Q8BSM7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc43a1Q8BSM7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc43a1Q8BSM7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc43a1Q8BSM7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc43a1Q8BSM7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.64■■□□□ 1.06
Slc43a1Q8BSM7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc43a1Q8BSM7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Slc43a1Q8BSM7 Gm13241-201ENSMUST00000094493 780 ntBASIC21.64■■□□□ 1.05
Slc43a1Q8BSM7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Slc43a1Q8BSM7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
Slc43a1Q8BSM7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc43a1Q8BSM7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc43a1Q8BSM7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc43a1Q8BSM7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc43a1Q8BSM7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc43a1Q8BSM7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms