Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf4Q8BQZ5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4Q8BQZ5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4Q8BQZ5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4Q8BQZ5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf4Q8BQZ5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf4Q8BQZ5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cpsf4Q8BQZ5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.69■□□□□ 0.9
Cpsf4Q8BQZ5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpsf4Q8BQZ5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpsf4Q8BQZ5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf4Q8BQZ5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpsf4Q8BQZ5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf4Q8BQZ5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cpsf4Q8BQZ5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf4Q8BQZ5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.66■□□□□ 0.9
Cpsf4Q8BQZ5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf4Q8BQZ5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf4Q8BQZ5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf4Q8BQZ5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf4Q8BQZ5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf4Q8BQZ5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cpsf4Q8BQZ5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf4Q8BQZ5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf4Q8BQZ5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4Q8BQZ5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4Q8BQZ5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4Q8BQZ5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.63■□□□□ 0.89
Cpsf4Q8BQZ5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf4Q8BQZ5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.62■□□□□ 0.89
Cpsf4Q8BQZ5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Cpsf4Q8BQZ5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf4Q8BQZ5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf4Q8BQZ5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms