Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Csnk1a1Q8BK63 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Csnk1a1Q8BK63 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Csnk1a1Q8BK63 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Csnk1a1Q8BK63 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Csnk1a1Q8BK63 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Csnk1a1Q8BK63 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Csnk1a1Q8BK63 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Csnk1a1Q8BK63 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.02■□□□□ 0.63
Csnk1a1Q8BK63 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Csnk1a1Q8BK63 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Csnk1a1Q8BK63 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Csnk1a1Q8BK63 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.98■□□□□ 0.63
Csnk1a1Q8BK63 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Csnk1a1Q8BK63 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Csnk1a1Q8BK63 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Csnk1a1Q8BK63 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.94■□□□□ 0.62
Csnk1a1Q8BK63 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Csnk1a1Q8BK63 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms