Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms