Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VcanQ62059 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VcanQ62059 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VcanQ62059 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VcanQ62059 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
VcanQ62059 Gm27405-201ENSMUST00000184201 112 ntBASIC20.71■□□□□ 0.91
VcanQ62059 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VcanQ62059 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VcanQ62059 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VcanQ62059 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.71■□□□□ 0.91
VcanQ62059 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.71■□□□□ 0.91
VcanQ62059 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VcanQ62059 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VcanQ62059 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VcanQ62059 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VcanQ62059 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VcanQ62059 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
VcanQ62059 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.69■□□□□ 0.9
VcanQ62059 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VcanQ62059 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.69■□□□□ 0.9
VcanQ62059 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VcanQ62059 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VcanQ62059 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VcanQ62059 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VcanQ62059 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VcanQ62059 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.67■□□□□ 0.9
VcanQ62059 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VcanQ62059 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VcanQ62059 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VcanQ62059 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
VcanQ62059 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VcanQ62059 Gm37179-201ENSMUST00000194862 823 ntBASIC20.65■□□□□ 0.9
VcanQ62059 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.65■□□□□ 0.9
VcanQ62059 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VcanQ62059 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VcanQ62059 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VcanQ62059 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VcanQ62059 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.63■□□□□ 0.89
VcanQ62059 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.63■□□□□ 0.89
VcanQ62059 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VcanQ62059 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VcanQ62059 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.63■□□□□ 0.89
VcanQ62059 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
VcanQ62059 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VcanQ62059 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.62■□□□□ 0.89
VcanQ62059 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
VcanQ62059 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VcanQ62059 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VcanQ62059 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VcanQ62059 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VcanQ62059 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VcanQ62059 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VcanQ62059 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.61■□□□□ 0.89
VcanQ62059 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VcanQ62059 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
VcanQ62059 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VcanQ62059 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.61■□□□□ 0.89
VcanQ62059 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.6■□□□□ 0.89
VcanQ62059 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.6■□□□□ 0.89
VcanQ62059 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.6■□□□□ 0.89
VcanQ62059 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.6■□□□□ 0.89
VcanQ62059 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VcanQ62059 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.59■□□□□ 0.89
VcanQ62059 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VcanQ62059 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.59■□□□□ 0.89
VcanQ62059 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VcanQ62059 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VcanQ62059 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VcanQ62059 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VcanQ62059 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.59■□□□□ 0.89
VcanQ62059 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VcanQ62059 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
VcanQ62059 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VcanQ62059 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
VcanQ62059 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VcanQ62059 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.58■□□□□ 0.88
VcanQ62059 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VcanQ62059 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VcanQ62059 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VcanQ62059 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.57■□□□□ 0.88
VcanQ62059 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
VcanQ62059 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VcanQ62059 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VcanQ62059 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms