Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cln3Q61124 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
Cln3Q61124 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cln3Q61124 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cln3Q61124 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Cln3Q61124 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Cln3Q61124 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.97■■□□□ 1.43
Cln3Q61124 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cln3Q61124 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Cln3Q61124 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.96■■□□□ 1.43
Cln3Q61124 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.96■■□□□ 1.43
Cln3Q61124 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Cln3Q61124 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cln3Q61124 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
Cln3Q61124 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cln3Q61124 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.95■■□□□ 1.42
Cln3Q61124 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.95■■□□□ 1.42
Cln3Q61124 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cln3Q61124 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cln3Q61124 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cln3Q61124 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.94■■□□□ 1.42
Cln3Q61124 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Cln3Q61124 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cln3Q61124 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cln3Q61124 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cln3Q61124 Gm12922-201ENSMUST00000120626 809 ntBASIC23.93■■□□□ 1.42
Cln3Q61124 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cln3Q61124 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.92■■□□□ 1.42
Cln3Q61124 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.92■■□□□ 1.42
Cln3Q61124 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cln3Q61124 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cln3Q61124 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cln3Q61124 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cln3Q61124 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cln3Q61124 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cln3Q61124 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.9■■□□□ 1.42
Cln3Q61124 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cln3Q61124 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.9■■□□□ 1.42
Cln3Q61124 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.89■■□□□ 1.41
Cln3Q61124 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Cln3Q61124 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.88■■□□□ 1.41
Cln3Q61124 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cln3Q61124 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.87■■□□□ 1.41
Cln3Q61124 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.87■■□□□ 1.41
Cln3Q61124 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cln3Q61124 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cln3Q61124 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cln3Q61124 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cln3Q61124 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.86■■□□□ 1.41
Cln3Q61124 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.86■■□□□ 1.41
Cln3Q61124 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cln3Q61124 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Cln3Q61124 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.85■■□□□ 1.41
Cln3Q61124 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cln3Q61124 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cln3Q61124 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cln3Q61124 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.84■■□□□ 1.41
Cln3Q61124 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
Cln3Q61124 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Cln3Q61124 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cln3Q61124 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.84■■□□□ 1.41
Cln3Q61124 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.84■■□□□ 1.41
Cln3Q61124 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Cln3Q61124 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cln3Q61124 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cln3Q61124 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Cln3Q61124 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.4
Cln3Q61124 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cln3Q61124 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Cln3Q61124 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cln3Q61124 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.8■■□□□ 1.4
Cln3Q61124 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cln3Q61124 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cln3Q61124 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cln3Q61124 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cln3Q61124 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms