Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Shroom1Q5SX79 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Shroom1Q5SX79 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom1Q5SX79 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Shroom1Q5SX79 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom1Q5SX79 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom1Q5SX79 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shroom1Q5SX79 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.83■■□□□ 1.24
Shroom1Q5SX79 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Shroom1Q5SX79 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom1Q5SX79 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Shroom1Q5SX79 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Shroom1Q5SX79 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shroom1Q5SX79 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Shroom1Q5SX79 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shroom1Q5SX79 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Shroom1Q5SX79 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shroom1Q5SX79 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Shroom1Q5SX79 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.77■■□□□ 1.24
Shroom1Q5SX79 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Shroom1Q5SX79 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom1Q5SX79 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom1Q5SX79 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom1Q5SX79 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.75■■□□□ 1.23
Shroom1Q5SX79 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom1Q5SX79 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Gm7417-201ENSMUST00000192950 473 ntBASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom1Q5SX79 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom1Q5SX79 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms