Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-3Q5R1I1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 Scarna2-201ENSMUST00000157560 414 ntBASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-3Q5R1I1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav7d-3Q5R1I1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Gm11687-201ENSMUST00000118911 886 ntBASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav7d-3Q5R1I1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav7d-3Q5R1I1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Gm16437-201ENSMUST00000025669 507 ntBASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7d-3Q5R1I1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7d-3Q5R1I1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7d-3Q5R1I1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7d-3Q5R1I1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7d-3Q5R1I1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7d-3Q5R1I1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-3Q5R1I1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-3Q5R1I1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms