Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clhc1Q5M6W3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clhc1Q5M6W3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clhc1Q5M6W3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clhc1Q5M6W3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clhc1Q5M6W3 Gm45364-201ENSMUST00000210883 159 ntBASIC20.57■□□□□ 0.88
Clhc1Q5M6W3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clhc1Q5M6W3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clhc1Q5M6W3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.55■□□□□ 0.88
Clhc1Q5M6W3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clhc1Q5M6W3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clhc1Q5M6W3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.52■□□□□ 0.88
Clhc1Q5M6W3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clhc1Q5M6W3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.52■□□□□ 0.88
Clhc1Q5M6W3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clhc1Q5M6W3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clhc1Q5M6W3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clhc1Q5M6W3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.49■□□□□ 0.87
Clhc1Q5M6W3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clhc1Q5M6W3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clhc1Q5M6W3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Clhc1Q5M6W3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.49■□□□□ 0.87
Clhc1Q5M6W3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clhc1Q5M6W3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clhc1Q5M6W3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clhc1Q5M6W3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clhc1Q5M6W3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clhc1Q5M6W3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clhc1Q5M6W3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clhc1Q5M6W3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms