Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Q3U1D9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.66■□□□□ 0.58
Q3U1D9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.65■□□□□ 0.58
Q3U1D9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Q3U1D9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Q3U1D9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Q3U1D9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q3U1D9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.64■□□□□ 0.57
Q3U1D9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3U1D9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3U1D9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.64■□□□□ 0.57
Q3U1D9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Q3U1D9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Q3U1D9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q3U1D9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q3U1D9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q3U1D9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Q3U1D9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Q3U1D9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3U1D9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Q3U1D9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.62■□□□□ 0.57
Q3U1D9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.62■□□□□ 0.57
Q3U1D9 Gm40881-201ENSMUST00000223397 166 ntBASIC18.62■□□□□ 0.57
Q3U1D9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.62■□□□□ 0.57
Q3U1D9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3U1D9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Q3U1D9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Q3U1D9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Q3U1D9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3U1D9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.61■□□□□ 0.57
Q3U1D9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Gm10399-202ENSMUST00000202768 748 ntBASIC18.61■□□□□ 0.57
Q3U1D9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3U1D9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3U1D9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3U1D9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3U1D9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3U1D9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.6■□□□□ 0.57
Q3U1D9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.6■□□□□ 0.57
Q3U1D9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3U1D9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.6■□□□□ 0.57
Q3U1D9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.6■□□□□ 0.57
Q3U1D9 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.6■□□□□ 0.57
Q3U1D9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Q3U1D9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3U1D9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3U1D9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.59■□□□□ 0.57
Q3U1D9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3U1D9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3U1D9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.58■□□□□ 0.56
Q3U1D9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3U1D9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3U1D9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3U1D9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3U1D9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3U1D9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3U1D9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Q3U1D9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q3U1D9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q3U1D9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q3U1D9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q3U1D9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q3U1D9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
Q3U1D9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
Q3U1D9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.54■□□□□ 0.56
Q3U1D9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Q3U1D9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Q3U1D9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q3U1D9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q3U1D9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q3U1D9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.54■□□□□ 0.56
Q3U1D9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Q3U1D9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.53■□□□□ 0.56
Q3U1D9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q3U1D9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Q3U1D9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms