Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Shroom4Q1W617 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
Shroom4Q1W617 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Shroom4Q1W617 Golgb1-201ENSMUST00000023534 498 ntBASIC34.96■■■■□ 3.19
Shroom4Q1W617 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
Shroom4Q1W617 Gm27454-201ENSMUST00000185090 204 ntBASIC34.95■■■■□ 3.19
Shroom4Q1W617 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC34.95■■■■□ 3.19
Shroom4Q1W617 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC34.95■■■■□ 3.19
Shroom4Q1W617 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Shroom4Q1W617 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Shroom4Q1W617 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
Shroom4Q1W617 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Shroom4Q1W617 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC34.92■■■■□ 3.18
Shroom4Q1W617 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Shroom4Q1W617 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Appbp2os-202ENSMUST00000206972 447 ntBASIC34.91■■■■□ 3.18
Shroom4Q1W617 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Shroom4Q1W617 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC34.9■■■■□ 3.18
Shroom4Q1W617 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Shroom4Q1W617 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
Shroom4Q1W617 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Shroom4Q1W617 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC34.89■■■■□ 3.18
Shroom4Q1W617 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Shroom4Q1W617 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Shroom4Q1W617 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC34.88■■■■□ 3.17
Shroom4Q1W617 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
Shroom4Q1W617 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Shroom4Q1W617 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Shroom4Q1W617 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC34.87■■■■□ 3.17
Shroom4Q1W617 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
Shroom4Q1W617 Gm10620-201ENSMUST00000098379 1332 ntBASIC34.86■■■■□ 3.17
Shroom4Q1W617 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Shroom4Q1W617 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Shroom4Q1W617 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
Shroom4Q1W617 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Shroom4Q1W617 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Shroom4Q1W617 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Shroom4Q1W617 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Shroom4Q1W617 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Shroom4Q1W617 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC34.84■■■■□ 3.17
Shroom4Q1W617 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
Shroom4Q1W617 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC34.84■■■■□ 3.17
Shroom4Q1W617 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Shroom4Q1W617 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Shroom4Q1W617 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
Shroom4Q1W617 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
Shroom4Q1W617 Gm45417-201ENSMUST00000209533 758 ntBASIC34.83■■■■□ 3.17
Shroom4Q1W617 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Shroom4Q1W617 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Shroom4Q1W617 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC34.81■■■■□ 3.16
Shroom4Q1W617 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Shroom4Q1W617 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC34.81■■■■□ 3.16
Shroom4Q1W617 Gm6934-201ENSMUST00000194780 1905 ntBASIC34.8■■■■□ 3.16
Shroom4Q1W617 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC34.8■■■■□ 3.16
Shroom4Q1W617 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Shroom4Q1W617 Gm12821-201ENSMUST00000120022 600 ntBASIC34.8■■■■□ 3.16
Shroom4Q1W617 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Shroom4Q1W617 Serp2-204ENSMUST00000228055 705 ntBASIC34.8■■■■□ 3.16
Shroom4Q1W617 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Shroom4Q1W617 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Shroom4Q1W617 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Shroom4Q1W617 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC34.79■■■■□ 3.16
Shroom4Q1W617 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Shroom4Q1W617 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Shroom4Q1W617 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Shroom4Q1W617 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Shroom4Q1W617 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
Shroom4Q1W617 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC34.77■■■■□ 3.16
Shroom4Q1W617 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
Shroom4Q1W617 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Shroom4Q1W617 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC34.75■■■■□ 3.15
Shroom4Q1W617 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC34.74■■■■□ 3.15
Shroom4Q1W617 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC34.74■■■■□ 3.15
Shroom4Q1W617 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
Shroom4Q1W617 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC34.74■■■■□ 3.15
Shroom4Q1W617 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Shroom4Q1W617 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC34.73■■■■□ 3.15
Shroom4Q1W617 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Shroom4Q1W617 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Shroom4Q1W617 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms