Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Gm45102-201ENSMUST00000207427 857 ntBASIC20.19■□□□□ 0.82
Nkx3-2P97503 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.19■□□□□ 0.82
Nkx3-2P97503 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nkx3-2P97503 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Nkx3-2P97503 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.18■□□□□ 0.82
Nkx3-2P97503 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx3-2P97503 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx3-2P97503 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx3-2P97503 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.17■□□□□ 0.82
Nkx3-2P97503 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Rps24-207ENSMUST00000224568 714 ntBASIC20.17■□□□□ 0.82
Nkx3-2P97503 Gm10232-201ENSMUST00000089221 720 ntBASIC20.17■□□□□ 0.82
Nkx3-2P97503 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx3-2P97503 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx3-2P97503 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx3-2P97503 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx3-2P97503 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.15■□□□□ 0.82
Nkx3-2P97503 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.15■□□□□ 0.82
Nkx3-2P97503 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx3-2P97503 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Nkx3-2P97503 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx3-2P97503 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.14■□□□□ 0.81
Nkx3-2P97503 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx3-2P97503 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx3-2P97503 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nkx3-2P97503 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nkx3-2P97503 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx3-2P97503 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx3-2P97503 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.13■□□□□ 0.81
Nkx3-2P97503 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nkx3-2P97503 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.13■□□□□ 0.81
Nkx3-2P97503 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkx3-2P97503 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nkx3-2P97503 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx3-2P97503 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx3-2P97503 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx3-2P97503 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkx3-2P97503 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx3-2P97503 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.11■□□□□ 0.81
Nkx3-2P97503 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Nkx3-2P97503 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Nkx3-2P97503 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkx3-2P97503 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx3-2P97503 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.09■□□□□ 0.81
Nkx3-2P97503 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx3-2P97503 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx3-2P97503 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx3-2P97503 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx3-2P97503 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx3-2P97503 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx3-2P97503 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx3-2P97503 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx3-2P97503 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkx3-2P97503 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx3-2P97503 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms