Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Etf1-202ENSMUST00000180351 108 ntBASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r1P70441 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r1P70441 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slc9a3r1P70441 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.52■□□□□ 0.88
Slc9a3r1P70441 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r1P70441 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc9a3r1P70441 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r1P70441 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc9a3r1P70441 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc9a3r1P70441 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r1P70441 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r1P70441 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Slc9a3r1P70441 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Slc9a3r1P70441 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Slc9a3r1P70441 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Slc9a3r1P70441 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc9a3r1P70441 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc9a3r1P70441 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.47■□□□□ 0.87
Slc9a3r1P70441 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc9a3r1P70441 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc9a3r1P70441 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Slc9a3r1P70441 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc9a3r1P70441 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.45■□□□□ 0.86
Slc9a3r1P70441 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc9a3r1P70441 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc9a3r1P70441 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc9a3r1P70441 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc9a3r1P70441 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Slc9a3r1P70441 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc9a3r1P70441 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.41■□□□□ 0.86
Slc9a3r1P70441 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc9a3r1P70441 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a3r1P70441 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms