Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmx3P42581 Gm11599-201ENSMUST00000118720 878 ntBASIC17.68■□□□□ 0.42
Hmx3P42581 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmx3P42581 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmx3P42581 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Hmx3P42581 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmx3P42581 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.67■□□□□ 0.42
Hmx3P42581 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hmx3P42581 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmx3P42581 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hmx3P42581 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmx3P42581 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Hmx3P42581 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmx3P42581 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hmx3P42581 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hmx3P42581 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmx3P42581 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.65■□□□□ 0.42
Hmx3P42581 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hmx3P42581 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hmx3P42581 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.65■□□□□ 0.42
Hmx3P42581 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hmx3P42581 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmx3P42581 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hmx3P42581 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmx3P42581 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.64■□□□□ 0.41
Hmx3P42581 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmx3P42581 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Hmx3P42581 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hmx3P42581 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hmx3P42581 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hmx3P42581 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Hmx3P42581 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hmx3P42581 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hmx3P42581 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.63■□□□□ 0.41
Hmx3P42581 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmx3P42581 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hmx3P42581 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmx3P42581 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmx3P42581 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.62■□□□□ 0.41
Hmx3P42581 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmx3P42581 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmx3P42581 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmx3P42581 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.61■□□□□ 0.41
Hmx3P42581 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmx3P42581 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.61■□□□□ 0.41
Hmx3P42581 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hmx3P42581 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmx3P42581 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hmx3P42581 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmx3P42581 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmx3P42581 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Mir3960-201ENSMUST00000198213 73 ntBASIC17.6■□□□□ 0.41
Hmx3P42581 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hmx3P42581 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hmx3P42581 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmx3P42581 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hmx3P42581 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmx3P42581 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmx3P42581 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmx3P42581 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hmx3P42581 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmx3P42581 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hmx3P42581 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmx3P42581 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmx3P42581 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmx3P42581 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmx3P42581 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmx3P42581 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmx3P42581 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmx3P42581 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hmx3P42581 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
Hmx3P42581 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.56■□□□□ 0.4
Hmx3P42581 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmx3P42581 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hmx3P42581 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmx3P42581 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmx3P42581 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmx3P42581 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmx3P42581 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hmx3P42581 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmx3P42581 Gm45364-201ENSMUST00000210883 159 ntBASIC17.55■□□□□ 0.4
Hmx3P42581 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hmx3P42581 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.55■□□□□ 0.4
Hmx3P42581 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmx3P42581 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 200.5 ms