Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca1P41233 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abca1P41233 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abca1P41233 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Abca1P41233 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.65■□□□□ 0.42
Abca1P41233 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.65■□□□□ 0.42
Abca1P41233 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abca1P41233 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Abca1P41233 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.64■□□□□ 0.41
Abca1P41233 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abca1P41233 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.63■□□□□ 0.41
Abca1P41233 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Abca1P41233 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Abca1P41233 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Abca1P41233 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abca1P41233 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.63■□□□□ 0.41
Abca1P41233 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.62■□□□□ 0.41
Abca1P41233 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Abca1P41233 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abca1P41233 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.61■□□□□ 0.41
Abca1P41233 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.61■□□□□ 0.41
Abca1P41233 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abca1P41233 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
Abca1P41233 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abca1P41233 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Abca1P41233 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.59■□□□□ 0.41
Abca1P41233 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Abca1P41233 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.59■□□□□ 0.41
Abca1P41233 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Gm27454-201ENSMUST00000185090 204 ntBASIC17.59■□□□□ 0.41
Abca1P41233 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abca1P41233 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.58■□□□□ 0.4
Abca1P41233 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.58■□□□□ 0.4
Abca1P41233 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Abca1P41233 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca1P41233 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca1P41233 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abca1P41233 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.58■□□□□ 0.4
Abca1P41233 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca1P41233 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abca1P41233 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abca1P41233 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms