Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc6a1P31648 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.37■□□□□ 0.53
Slc6a1P31648 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Slc6a1P31648 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a1P31648 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a1P31648 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a1P31648 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a1P31648 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a1P31648 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a1P31648 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc6a1P31648 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a1P31648 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.34■□□□□ 0.53
Slc6a1P31648 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a1P31648 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.33■□□□□ 0.53
Slc6a1P31648 Gm22567-201ENSMUST00000175542 342 ntBASIC18.33■□□□□ 0.52
Slc6a1P31648 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc6a1P31648 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a1P31648 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc6a1P31648 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a1P31648 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a1P31648 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc6a1P31648 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Slc6a1P31648 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Slc6a1P31648 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc6a1P31648 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc6a1P31648 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc6a1P31648 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a1P31648 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a1P31648 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc6a1P31648 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc6a1P31648 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc6a1P31648 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc6a1P31648 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a1P31648 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slc6a1P31648 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.29■□□□□ 0.52
Slc6a1P31648 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a1P31648 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc6a1P31648 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.28■□□□□ 0.52
Slc6a1P31648 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Slc6a1P31648 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Slc6a1P31648 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc6a1P31648 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.27■□□□□ 0.52
Slc6a1P31648 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a1P31648 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc6a1P31648 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Slc6a1P31648 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a1P31648 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Slc6a1P31648 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slc6a1P31648 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a1P31648 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.26■□□□□ 0.51
Slc6a1P31648 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a1P31648 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a1P31648 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a1P31648 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a1P31648 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a1P31648 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a1P31648 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc6a1P31648 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a1P31648 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms