Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.31■■□□□ 1.32
Pde6bP23440 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pde6bP23440 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pde6bP23440 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Pde6bP23440 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pde6bP23440 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.3■■□□□ 1.32
Pde6bP23440 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.3■■□□□ 1.32
Pde6bP23440 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pde6bP23440 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Pde6bP23440 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pde6bP23440 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pde6bP23440 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pde6bP23440 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pde6bP23440 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.29■■□□□ 1.32
Pde6bP23440 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.29■■□□□ 1.32
Pde6bP23440 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Pde6bP23440 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.29■■□□□ 1.32
Pde6bP23440 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Pde6bP23440 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pde6bP23440 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pde6bP23440 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pde6bP23440 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pde6bP23440 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pde6bP23440 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pde6bP23440 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pde6bP23440 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.27■■□□□ 1.32
Pde6bP23440 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pde6bP23440 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Pde6bP23440 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.27■■□□□ 1.32
Pde6bP23440 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pde6bP23440 Gm40881-201ENSMUST00000223397 166 ntBASIC23.27■■□□□ 1.32
Pde6bP23440 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
Pde6bP23440 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pde6bP23440 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.27■■□□□ 1.31
Pde6bP23440 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pde6bP23440 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pde6bP23440 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pde6bP23440 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pde6bP23440 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pde6bP23440 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pde6bP23440 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pde6bP23440 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pde6bP23440 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pde6bP23440 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.25■■□□□ 1.31
Pde6bP23440 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.25■■□□□ 1.31
Pde6bP23440 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pde6bP23440 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pde6bP23440 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pde6bP23440 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.24■■□□□ 1.31
Pde6bP23440 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pde6bP23440 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.24■■□□□ 1.31
Pde6bP23440 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pde6bP23440 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pde6bP23440 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.23■■□□□ 1.31
Pde6bP23440 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.23■■□□□ 1.31
Pde6bP23440 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Pde6bP23440 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pde6bP23440 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pde6bP23440 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pde6bP23440 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pde6bP23440 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pde6bP23440 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Pde6bP23440 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pde6bP23440 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pde6bP23440 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pde6bP23440 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.21■■□□□ 1.31
Pde6bP23440 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pde6bP23440 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Pde6bP23440 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pde6bP23440 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pde6bP23440 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pde6bP23440 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pde6bP23440 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.2■■□□□ 1.3
Pde6bP23440 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.2■■□□□ 1.3
Pde6bP23440 Gm13241-201ENSMUST00000094493 780 ntBASIC23.2■■□□□ 1.3
Pde6bP23440 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pde6bP23440 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pde6bP23440 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pde6bP23440 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Pde6bP23440 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.19■■□□□ 1.3
Pde6bP23440 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pde6bP23440 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.19■■□□□ 1.3
Pde6bP23440 Gm22238-201ENSMUST00000175222 88 ntBASIC23.19■■□□□ 1.3
Pde6bP23440 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pde6bP23440 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pde6bP23440 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Pde6bP23440 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pde6bP23440 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.18■■□□□ 1.3
Pde6bP23440 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pde6bP23440 Gm10399-202ENSMUST00000202768 748 ntBASIC23.18■■□□□ 1.3
Pde6bP23440 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pde6bP23440 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pde6bP23440 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pde6bP23440 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms