Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sod1P08228 Gm12922-201ENSMUST00000120626 809 ntBASIC20.59■□□□□ 0.89
Sod1P08228 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.59■□□□□ 0.89
Sod1P08228 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sod1P08228 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sod1P08228 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sod1P08228 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sod1P08228 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sod1P08228 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sod1P08228 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sod1P08228 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sod1P08228 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sod1P08228 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Sod1P08228 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sod1P08228 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sod1P08228 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sod1P08228 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sod1P08228 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.56■□□□□ 0.88
Sod1P08228 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.56■□□□□ 0.88
Sod1P08228 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Sod1P08228 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
Sod1P08228 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sod1P08228 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sod1P08228 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.55■□□□□ 0.88
Sod1P08228 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sod1P08228 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.55■□□□□ 0.88
Sod1P08228 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sod1P08228 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.54■□□□□ 0.88
Sod1P08228 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sod1P08228 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sod1P08228 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sod1P08228 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sod1P08228 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sod1P08228 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sod1P08228 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sod1P08228 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
Sod1P08228 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sod1P08228 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.52■□□□□ 0.88
Sod1P08228 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.52■□□□□ 0.88
Sod1P08228 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sod1P08228 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.52■□□□□ 0.87
Sod1P08228 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sod1P08228 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.51■□□□□ 0.87
Sod1P08228 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.51■□□□□ 0.87
Sod1P08228 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.51■□□□□ 0.87
Sod1P08228 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sod1P08228 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sod1P08228 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sod1P08228 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sod1P08228 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.5■□□□□ 0.87
Sod1P08228 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sod1P08228 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.5■□□□□ 0.87
Sod1P08228 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sod1P08228 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sod1P08228 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sod1P08228 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sod1P08228 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sod1P08228 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sod1P08228 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.48■□□□□ 0.87
Sod1P08228 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sod1P08228 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Sod1P08228 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.48■□□□□ 0.87
Sod1P08228 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sod1P08228 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sod1P08228 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Sod1P08228 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sod1P08228 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Sod1P08228 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Sod1P08228 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sod1P08228 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.46■□□□□ 0.87
Sod1P08228 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sod1P08228 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sod1P08228 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sod1P08228 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.45■□□□□ 0.86
Sod1P08228 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sod1P08228 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sod1P08228 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sod1P08228 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.44■□□□□ 0.86
Sod1P08228 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.44■□□□□ 0.86
Sod1P08228 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.44■□□□□ 0.86
Sod1P08228 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.44■□□□□ 0.86
Sod1P08228 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sod1P08228 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.44■□□□□ 0.86
Sod1P08228 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sod1P08228 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sod1P08228 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sod1P08228 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sod1P08228 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.43■□□□□ 0.86
Sod1P08228 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sod1P08228 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sod1P08228 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sod1P08228 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms