Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.87■□□□□ 0.45
Ercc1P07903 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ercc1P07903 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Ercc1P07903 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc1P07903 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc1P07903 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc1P07903 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.86■□□□□ 0.45
Ercc1P07903 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.86■□□□□ 0.45
Ercc1P07903 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc1P07903 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.86■□□□□ 0.45
Ercc1P07903 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ercc1P07903 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.85■□□□□ 0.45
Ercc1P07903 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.85■□□□□ 0.45
Ercc1P07903 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc1P07903 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.85■□□□□ 0.45
Ercc1P07903 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc1P07903 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Ercc1P07903 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ercc1P07903 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ercc1P07903 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc1P07903 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc1P07903 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc1P07903 Gm7432-201ENSMUST00000210343 879 ntBASIC17.84■□□□□ 0.45
Ercc1P07903 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ercc1P07903 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc1P07903 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc1P07903 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ercc1P07903 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc1P07903 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc1P07903 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc1P07903 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc1P07903 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc1P07903 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ercc1P07903 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc1P07903 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ercc1P07903 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Ercc1P07903 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ercc1P07903 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc1P07903 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ercc1P07903 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc1P07903 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.82■□□□□ 0.44
Ercc1P07903 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.82■□□□□ 0.44
Ercc1P07903 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc1P07903 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ercc1P07903 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc1P07903 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ercc1P07903 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc1P07903 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc1P07903 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc1P07903 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ercc1P07903 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.81■□□□□ 0.44
Ercc1P07903 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ercc1P07903 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc1P07903 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc1P07903 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.8■□□□□ 0.44
Ercc1P07903 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ercc1P07903 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Ercc1P07903 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ercc1P07903 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ercc1P07903 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.79■□□□□ 0.44
Ercc1P07903 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
Ercc1P07903 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ercc1P07903 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.79■□□□□ 0.44
Ercc1P07903 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ercc1P07903 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc1P07903 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc1P07903 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc1P07903 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc1P07903 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ercc1P07903 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ercc1P07903 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ercc1P07903 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ercc1P07903 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ercc1P07903 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ercc1P07903 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.77■□□□□ 0.44
Ercc1P07903 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.77■□□□□ 0.44
Ercc1P07903 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ercc1P07903 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ercc1P07903 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ercc1P07903 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ercc1P07903 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.76■□□□□ 0.43
Ercc1P07903 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ercc1P07903 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms