Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn1O88551 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn1O88551 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn1O88551 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cldn1O88551 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.28■□□□□ 0.52
Cldn1O88551 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn1O88551 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn1O88551 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn1O88551 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn1O88551 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.28■□□□□ 0.52
Cldn1O88551 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.28■□□□□ 0.52
Cldn1O88551 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn1O88551 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Cldn1O88551 Gm12821-201ENSMUST00000120022 600 ntBASIC18.27■□□□□ 0.52
Cldn1O88551 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn1O88551 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cldn1O88551 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cldn1O88551 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cldn1O88551 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.26■□□□□ 0.51
Cldn1O88551 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.26■□□□□ 0.51
Cldn1O88551 Gm45417-201ENSMUST00000209533 758 ntBASIC18.26■□□□□ 0.51
Cldn1O88551 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cldn1O88551 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.26■□□□□ 0.51
Cldn1O88551 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn1O88551 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn1O88551 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Cldn1O88551 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn1O88551 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cldn1O88551 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldn1O88551 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.25■□□□□ 0.51
Cldn1O88551 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn1O88551 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cldn1O88551 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn1O88551 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cldn1O88551 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn1O88551 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cldn1O88551 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cldn1O88551 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.24■□□□□ 0.51
Cldn1O88551 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.23■□□□□ 0.51
Cldn1O88551 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cldn1O88551 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cldn1O88551 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn1O88551 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cldn1O88551 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn1O88551 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn1O88551 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.22■□□□□ 0.51
Cldn1O88551 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cldn1O88551 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Cldn1O88551 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn1O88551 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cldn1O88551 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn1O88551 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cldn1O88551 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.21■□□□□ 0.51
Cldn1O88551 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn1O88551 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Cldn1O88551 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cldn1O88551 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cldn1O88551 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cldn1O88551 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Cldn1O88551 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn1O88551 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn1O88551 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.19■□□□□ 0.5
Cldn1O88551 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn1O88551 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cldn1O88551 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn1O88551 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn1O88551 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn1O88551 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn1O88551 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cldn1O88551 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn1O88551 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn1O88551 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cldn1O88551 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.17■□□□□ 0.5
Cldn1O88551 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn1O88551 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cldn1O88551 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cldn1O88551 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Cldn1O88551 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn1O88551 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms