Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops3O88543 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops3O88543 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Cops3O88543 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops3O88543 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cops3O88543 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops3O88543 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cops3O88543 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.12■□□□□ 0.65
Cops3O88543 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cops3O88543 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cops3O88543 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.11■□□□□ 0.65
Cops3O88543 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cops3O88543 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cops3O88543 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.11■□□□□ 0.65
Cops3O88543 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cops3O88543 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cops3O88543 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.1■□□□□ 0.65
Cops3O88543 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cops3O88543 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.1■□□□□ 0.65
Cops3O88543 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Cops3O88543 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops3O88543 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Cops3O88543 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.09■□□□□ 0.65
Cops3O88543 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.09■□□□□ 0.65
Cops3O88543 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.09■□□□□ 0.65
Cops3O88543 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops3O88543 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cops3O88543 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops3O88543 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops3O88543 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops3O88543 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cops3O88543 Gm44428-201ENSMUST00000204474 874 ntBASIC19.08■□□□□ 0.64
Cops3O88543 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cops3O88543 Gm6311-201ENSMUST00000073790 878 ntBASIC19.08■□□□□ 0.64
Cops3O88543 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cops3O88543 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops3O88543 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops3O88543 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops3O88543 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.07■□□□□ 0.64
Cops3O88543 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops3O88543 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops3O88543 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cops3O88543 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.06■□□□□ 0.64
Cops3O88543 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cops3O88543 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cops3O88543 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cops3O88543 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Cops3O88543 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cops3O88543 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cops3O88543 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops3O88543 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cops3O88543 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cops3O88543 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cops3O88543 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cops3O88543 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.05■□□□□ 0.64
Cops3O88543 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops3O88543 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops3O88543 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Cops3O88543 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cops3O88543 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops3O88543 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Cops3O88543 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Cops3O88543 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.04■□□□□ 0.64
Cops3O88543 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops3O88543 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cops3O88543 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cops3O88543 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.03■□□□□ 0.64
Cops3O88543 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cops3O88543 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops3O88543 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cops3O88543 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.03■□□□□ 0.64
Cops3O88543 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cops3O88543 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cops3O88543 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops3O88543 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.02■□□□□ 0.64
Cops3O88543 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops3O88543 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops3O88543 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cops3O88543 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.02■□□□□ 0.64
Cops3O88543 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops3O88543 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.02■□□□□ 0.64
Cops3O88543 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops3O88543 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cops3O88543 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops3O88543 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Cops3O88543 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Cops3O88543 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms