Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd46O88174 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.41■□□□□ 0.7
Cd46O88174 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd46O88174 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd46O88174 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd46O88174 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd46O88174 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd46O88174 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cd46O88174 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.4■□□□□ 0.7
Cd46O88174 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.4■□□□□ 0.7
Cd46O88174 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd46O88174 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd46O88174 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd46O88174 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd46O88174 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cd46O88174 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd46O88174 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.39■□□□□ 0.69
Cd46O88174 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.39■□□□□ 0.69
Cd46O88174 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd46O88174 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd46O88174 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cd46O88174 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.38■□□□□ 0.69
Cd46O88174 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.38■□□□□ 0.69
Cd46O88174 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd46O88174 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd46O88174 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd46O88174 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd46O88174 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Cd46O88174 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.37■□□□□ 0.69
Cd46O88174 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd46O88174 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.37■□□□□ 0.69
Cd46O88174 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd46O88174 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cd46O88174 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd46O88174 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd46O88174 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cd46O88174 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cd46O88174 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.36■□□□□ 0.69
Cd46O88174 Serp2-204ENSMUST00000228055 705 ntBASIC19.36■□□□□ 0.69
Cd46O88174 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd46O88174 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd46O88174 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd46O88174 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd46O88174 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cd46O88174 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd46O88174 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd46O88174 Gm12821-201ENSMUST00000120022 600 ntBASIC19.34■□□□□ 0.69
Cd46O88174 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd46O88174 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.34■□□□□ 0.69
Cd46O88174 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd46O88174 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Cd46O88174 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd46O88174 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd46O88174 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd46O88174 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd46O88174 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.33■□□□□ 0.68
Cd46O88174 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.33■□□□□ 0.68
Cd46O88174 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd46O88174 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Cd46O88174 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.32■□□□□ 0.68
Cd46O88174 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd46O88174 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cd46O88174 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd46O88174 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd46O88174 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd46O88174 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cd46O88174 Gm27454-201ENSMUST00000185090 204 ntBASIC19.3■□□□□ 0.68
Cd46O88174 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd46O88174 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.29■□□□□ 0.68
Cd46O88174 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd46O88174 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.29■□□□□ 0.68
Cd46O88174 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd46O88174 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Cd46O88174 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd46O88174 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd46O88174 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Cd46O88174 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd46O88174 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd46O88174 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.28■□□□□ 0.68
Cd46O88174 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd46O88174 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms