Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hps1O08983 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.64■□□□□ 0.73
Hps1O08983 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.64■□□□□ 0.73
Hps1O08983 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hps1O08983 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hps1O08983 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Hps1O08983 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hps1O08983 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.63■□□□□ 0.73
Hps1O08983 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.63■□□□□ 0.73
Hps1O08983 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 Gm45364-201ENSMUST00000210883 159 ntBASIC19.63■□□□□ 0.73
Hps1O08983 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hps1O08983 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps1O08983 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hps1O08983 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hps1O08983 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps1O08983 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hps1O08983 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Gm14523-201ENSMUST00000117260 558 ntBASIC19.61■□□□□ 0.73
Hps1O08983 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.61■□□□□ 0.73
Hps1O08983 Gm22567-201ENSMUST00000175542 342 ntBASIC19.61■□□□□ 0.73
Hps1O08983 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hps1O08983 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hps1O08983 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps1O08983 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hps1O08983 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps1O08983 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.6■□□□□ 0.73
Hps1O08983 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.6■□□□□ 0.73
Hps1O08983 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Hps1O08983 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hps1O08983 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.59■□□□□ 0.73
Hps1O08983 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hps1O08983 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.58■□□□□ 0.73
Hps1O08983 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hps1O08983 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hps1O08983 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hps1O08983 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps1O08983 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hps1O08983 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hps1O08983 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps1O08983 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps1O08983 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Hps1O08983 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.57■□□□□ 0.72
Hps1O08983 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hps1O08983 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps1O08983 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hps1O08983 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.56■□□□□ 0.72
Hps1O08983 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps1O08983 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hps1O08983 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.56■□□□□ 0.72
Hps1O08983 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Hps1O08983 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps1O08983 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps1O08983 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.56■□□□□ 0.72
Hps1O08983 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hps1O08983 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.55■□□□□ 0.72
Hps1O08983 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hps1O08983 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps1O08983 Gm5812-201ENSMUST00000061073 957 ntBASIC19.55■□□□□ 0.72
Hps1O08983 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hps1O08983 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hps1O08983 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps1O08983 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hps1O08983 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.54■□□□□ 0.72
Hps1O08983 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
Hps1O08983 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps1O08983 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Hps1O08983 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps1O08983 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps1O08983 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps1O08983 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.52■□□□□ 0.72
Hps1O08983 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps1O08983 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hps1O08983 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps1O08983 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Hps1O08983 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
Hps1O08983 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hps1O08983 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hps1O08983 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.51■□□□□ 0.71
Hps1O08983 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hps1O08983 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms