Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Gm6408J3QNG1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm6408J3QNG1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm6408J3QNG1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gm6408J3QNG1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm6408J3QNG1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm6408J3QNG1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm6408J3QNG1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm6408J3QNG1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm6408J3QNG1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm6408J3QNG1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm6408J3QNG1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm6408J3QNG1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm6408J3QNG1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm6408J3QNG1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Gm6408J3QNG1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm6408J3QNG1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm6408J3QNG1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm6408J3QNG1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm6408J3QNG1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Gm6408J3QNG1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.33■■□□□ 1.01
Gm6408J3QNG1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Gm6408J3QNG1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.33■■□□□ 1
Gm6408J3QNG1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm6408J3QNG1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm6408J3QNG1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm6408J3QNG1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm6408J3QNG1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm6408J3QNG1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.32■■□□□ 1
Gm6408J3QNG1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Gm6408J3QNG1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Gm6408J3QNG1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm6408J3QNG1 Gm11175-201ENSMUST00000116172 543 ntBASIC21.31■■□□□ 1
Gm6408J3QNG1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm6408J3QNG1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm6408J3QNG1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm6408J3QNG1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm6408J3QNG1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm6408J3QNG1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm6408J3QNG1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm6408J3QNG1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.3■■□□□ 1
Gm6408J3QNG1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm6408J3QNG1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm6408J3QNG1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.29■■□□□ 1
Gm6408J3QNG1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gm6408J3QNG1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm6408J3QNG1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.29■■□□□ 1
Gm6408J3QNG1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Gm6408J3QNG1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm6408J3QNG1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm6408J3QNG1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.28■■□□□ 1
Gm6408J3QNG1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm6408J3QNG1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm6408J3QNG1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm6408J3QNG1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.28■■□□□ 1
Gm6408J3QNG1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Gm6408J3QNG1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm6408J3QNG1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm6408J3QNG1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm6408J3QNG1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.27■□□□□ 0.99
Gm6408J3QNG1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm6408J3QNG1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms