Protein–RNA interactions for Protein: J3KMS0

Gm21411, Predicted gene, 21411, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21411J3KMS0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm21411J3KMS0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21411J3KMS0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21411J3KMS0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21411J3KMS0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21411J3KMS0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21411J3KMS0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21411J3KMS0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21411J3KMS0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm21411J3KMS0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.15■□□□□ 0.66
Gm21411J3KMS0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm21411J3KMS0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Gm21411J3KMS0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm21411J3KMS0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm21411J3KMS0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm21411J3KMS0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gm21411J3KMS0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms