Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Colca2F8VPY8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Colca2F8VPY8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Colca2F8VPY8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.9■□□□□ 0.94
Colca2F8VPY8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.89■□□□□ 0.94
Colca2F8VPY8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Colca2F8VPY8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Colca2F8VPY8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.89■□□□□ 0.93
Colca2F8VPY8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Colca2F8VPY8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Colca2F8VPY8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.89■□□□□ 0.93
Colca2F8VPY8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Colca2F8VPY8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Colca2F8VPY8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Colca2F8VPY8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Colca2F8VPY8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Colca2F8VPY8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Colca2F8VPY8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.87■□□□□ 0.93
Colca2F8VPY8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.87■□□□□ 0.93
Colca2F8VPY8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Colca2F8VPY8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Colca2F8VPY8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Colca2F8VPY8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Colca2F8VPY8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.85■□□□□ 0.93
Colca2F8VPY8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Colca2F8VPY8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Colca2F8VPY8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Colca2F8VPY8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Colca2F8VPY8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.84■□□□□ 0.93
Colca2F8VPY8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Colca2F8VPY8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Colca2F8VPY8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Colca2F8VPY8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Colca2F8VPY8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Colca2F8VPY8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.82■□□□□ 0.92
Colca2F8VPY8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
Colca2F8VPY8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Colca2F8VPY8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.81■□□□□ 0.92
Colca2F8VPY8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Colca2F8VPY8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.8■□□□□ 0.92
Colca2F8VPY8 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.8■□□□□ 0.92
Colca2F8VPY8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Colca2F8VPY8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Colca2F8VPY8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.79■□□□□ 0.92
Colca2F8VPY8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Colca2F8VPY8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Colca2F8VPY8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Colca2F8VPY8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Colca2F8VPY8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Colca2F8VPY8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Colca2F8VPY8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Colca2F8VPY8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Colca2F8VPY8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.75■□□□□ 0.91
Colca2F8VPY8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Colca2F8VPY8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Colca2F8VPY8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Colca2F8VPY8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Colca2F8VPY8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Colca2F8VPY8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Colca2F8VPY8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms