Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
Ccdc141E9Q8Q6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Ccdc141E9Q8Q6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ccdc141E9Q8Q6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Ccdc141E9Q8Q6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ccdc141E9Q8Q6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC33.24■■■□□ 2.91
Ccdc141E9Q8Q6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC33.24■■■□□ 2.91
Ccdc141E9Q8Q6 Slc35b2-207ENSMUST00000226086 850 ntBASIC33.24■■■□□ 2.91
Ccdc141E9Q8Q6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Ccdc141E9Q8Q6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Ccdc141E9Q8Q6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC33.22■■■□□ 2.91
Ccdc141E9Q8Q6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Ccdc141E9Q8Q6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
Ccdc141E9Q8Q6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Ccdc141E9Q8Q6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
Ccdc141E9Q8Q6 Gm28731-201ENSMUST00000185564 1569 ntBASIC33.21■■■□□ 2.91
Ccdc141E9Q8Q6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
Ccdc141E9Q8Q6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ccdc141E9Q8Q6 Gm10620-201ENSMUST00000098379 1332 ntBASIC33.2■■■□□ 2.91
Ccdc141E9Q8Q6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC33.2■■■□□ 2.91
Ccdc141E9Q8Q6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ccdc141E9Q8Q6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Ccdc141E9Q8Q6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC33.19■■■□□ 2.9
Ccdc141E9Q8Q6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ccdc141E9Q8Q6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ccdc141E9Q8Q6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC33.19■■■□□ 2.9
Ccdc141E9Q8Q6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ccdc141E9Q8Q6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Ccdc141E9Q8Q6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
Ccdc141E9Q8Q6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
Ccdc141E9Q8Q6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Ccdc141E9Q8Q6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC33.17■■■□□ 2.9
Ccdc141E9Q8Q6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Ccdc141E9Q8Q6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC33.16■■■□□ 2.9
Ccdc141E9Q8Q6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Ccdc141E9Q8Q6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ccdc141E9Q8Q6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Gm42699-201ENSMUST00000198104 1657 ntBASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC33.14■■■□□ 2.9
Ccdc141E9Q8Q6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC33.13■■■□□ 2.89
Ccdc141E9Q8Q6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC33.13■■■□□ 2.89
Ccdc141E9Q8Q6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ccdc141E9Q8Q6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ccdc141E9Q8Q6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Ccdc141E9Q8Q6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ccdc141E9Q8Q6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
Ccdc141E9Q8Q6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ccdc141E9Q8Q6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ccdc141E9Q8Q6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC33.1■■■□□ 2.89
Ccdc141E9Q8Q6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
Ccdc141E9Q8Q6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ccdc141E9Q8Q6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ccdc141E9Q8Q6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ccdc141E9Q8Q6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ccdc141E9Q8Q6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Ccdc141E9Q8Q6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC33.08■■■□□ 2.89
Ccdc141E9Q8Q6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Ccdc141E9Q8Q6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Ccdc141E9Q8Q6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC33.07■■■□□ 2.89
Ccdc141E9Q8Q6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Ccdc141E9Q8Q6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Ccdc141E9Q8Q6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
Ccdc141E9Q8Q6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
Ccdc141E9Q8Q6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ccdc141E9Q8Q6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ccdc141E9Q8Q6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Ccdc141E9Q8Q6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
Ccdc141E9Q8Q6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC33.04■■■□□ 2.88
Ccdc141E9Q8Q6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ccdc141E9Q8Q6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ccdc141E9Q8Q6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC33.03■■■□□ 2.88
Ccdc141E9Q8Q6 Gm18284-201ENSMUST00000172604 624 ntBASIC33.03■■■□□ 2.88
Ccdc141E9Q8Q6 Gm2011-201ENSMUST00000203124 1263 ntBASIC33.03■■■□□ 2.88
Ccdc141E9Q8Q6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ccdc141E9Q8Q6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC33.02■■■□□ 2.88
Ccdc141E9Q8Q6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC33.02■■■□□ 2.88
Ccdc141E9Q8Q6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ccdc141E9Q8Q6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ccdc141E9Q8Q6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC33.02■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms