Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r55E9Q8I6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r55E9Q8I6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r55E9Q8I6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.71■■□□□ 1.07
Vmn1r55E9Q8I6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r55E9Q8I6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r55E9Q8I6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r55E9Q8I6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r55E9Q8I6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.69■■□□□ 1.06
Vmn1r55E9Q8I6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Vmn1r55E9Q8I6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r55E9Q8I6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r55E9Q8I6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r55E9Q8I6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r55E9Q8I6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r55E9Q8I6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r55E9Q8I6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.65■■□□□ 1.06
Vmn1r55E9Q8I6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r55E9Q8I6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r55E9Q8I6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r55E9Q8I6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r55E9Q8I6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
Vmn1r55E9Q8I6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r55E9Q8I6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r55E9Q8I6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Vmn1r55E9Q8I6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r55E9Q8I6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r55E9Q8I6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Vmn1r55E9Q8I6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.61■■□□□ 1.05
Vmn1r55E9Q8I6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r55E9Q8I6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r55E9Q8I6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r55E9Q8I6 Gm13241-201ENSMUST00000094493 780 ntBASIC21.6■■□□□ 1.05
Vmn1r55E9Q8I6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r55E9Q8I6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r55E9Q8I6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.59■■□□□ 1.05
Vmn1r55E9Q8I6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Vmn1r55E9Q8I6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r55E9Q8I6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r55E9Q8I6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.58■■□□□ 1.05
Vmn1r55E9Q8I6 Gm9847-201ENSMUST00000052528 599 ntBASIC21.58■■□□□ 1.05
Vmn1r55E9Q8I6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vmn1r55E9Q8I6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r55E9Q8I6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Vmn1r55E9Q8I6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r55E9Q8I6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r55E9Q8I6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms