Protein–RNA interactions for Protein: A1L3C8

Gm5089, EG328479 protein, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5089A1L3C8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5089A1L3C8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm5089A1L3C8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm5089A1L3C8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5089A1L3C8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm5089A1L3C8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5089A1L3C8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5089A1L3C8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5089A1L3C8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.27■□□□□ 0.36
Gm5089A1L3C8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5089A1L3C8 Gm12821-201ENSMUST00000120022 600 ntBASIC17.26■□□□□ 0.35
Gm5089A1L3C8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.26■□□□□ 0.35
Gm5089A1L3C8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5089A1L3C8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5089A1L3C8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5089A1L3C8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm5089A1L3C8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Gm27454-201ENSMUST00000185090 204 ntBASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5089A1L3C8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5089A1L3C8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5089A1L3C8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.19■□□□□ 0.34
Gm5089A1L3C8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm5089A1L3C8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5089A1L3C8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Golgb1-201ENSMUST00000023534 498 ntBASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Gm5089A1L3C8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms