Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm28729A0A1B0GSW2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm28729A0A1B0GSW2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Gm28729A0A1B0GSW2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28729A0A1B0GSW2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Gm28729A0A1B0GSW2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm28729A0A1B0GSW2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28729A0A1B0GSW2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28729A0A1B0GSW2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.18■□□□□ 0.98
Gm28729A0A1B0GSW2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.18■□□□□ 0.98
Gm28729A0A1B0GSW2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.18■□□□□ 0.98
Gm28729A0A1B0GSW2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28729A0A1B0GSW2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm28729A0A1B0GSW2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28729A0A1B0GSW2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28729A0A1B0GSW2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28729A0A1B0GSW2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm28729A0A1B0GSW2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm28729A0A1B0GSW2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28729A0A1B0GSW2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm28729A0A1B0GSW2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm28729A0A1B0GSW2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.14■□□□□ 0.98
Gm28729A0A1B0GSW2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.14■□□□□ 0.98
Gm28729A0A1B0GSW2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.14■□□□□ 0.97
Gm28729A0A1B0GSW2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28729A0A1B0GSW2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm28729A0A1B0GSW2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Gm13241-201ENSMUST00000094493 780 ntBASIC21.13■□□□□ 0.97
Gm28729A0A1B0GSW2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm28729A0A1B0GSW2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28729A0A1B0GSW2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm28729A0A1B0GSW2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28729A0A1B0GSW2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28729A0A1B0GSW2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.08■□□□□ 0.97
Gm28729A0A1B0GSW2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gm28729A0A1B0GSW2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm28729A0A1B0GSW2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Gm28729A0A1B0GSW2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28729A0A1B0GSW2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28729A0A1B0GSW2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28729A0A1B0GSW2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28729A0A1B0GSW2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28729A0A1B0GSW2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28729A0A1B0GSW2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Gm28729A0A1B0GSW2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28729A0A1B0GSW2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm28729A0A1B0GSW2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms