Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcna-ps2A0A140T8V5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcna-ps2A0A140T8V5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcna-ps2A0A140T8V5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcna-ps2A0A140T8V5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Pcna-ps2A0A140T8V5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcna-ps2A0A140T8V5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcna-ps2A0A140T8V5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Pcna-ps2A0A140T8V5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcna-ps2A0A140T8V5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcna-ps2A0A140T8V5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcna-ps2A0A140T8V5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcna-ps2A0A140T8V5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcna-ps2A0A140T8V5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcna-ps2A0A140T8V5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcna-ps2A0A140T8V5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcna-ps2A0A140T8V5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcna-ps2A0A140T8V5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcna-ps2A0A140T8V5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcna-ps2A0A140T8V5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcna-ps2A0A140T8V5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Gm22567-201ENSMUST00000175542 342 ntBASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcna-ps2A0A140T8V5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcna-ps2A0A140T8V5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcna-ps2A0A140T8V5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcna-ps2A0A140T8V5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcna-ps2A0A140T8V5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcna-ps2A0A140T8V5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcna-ps2A0A140T8V5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcna-ps2A0A140T8V5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcna-ps2A0A140T8V5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcna-ps2A0A140T8V5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcna-ps2A0A140T8V5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcna-ps2A0A140T8V5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcna-ps2A0A140T8V5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Gm10420-201ENSMUST00000121713 882 ntBASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcna-ps2A0A140T8V5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcna-ps2A0A140T8V5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms