Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scn2aA0A0J9YTW6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm15546-201ENSMUST00000122095 826 ntBASIC19.79■□□□□ 0.76
Scn2aA0A0J9YTW6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn2aA0A0J9YTW6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn2aA0A0J9YTW6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn2aA0A0J9YTW6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn2aA0A0J9YTW6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn2aA0A0J9YTW6 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.78■□□□□ 0.76
Scn2aA0A0J9YTW6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn2aA0A0J9YTW6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn2aA0A0J9YTW6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Scn2aA0A0J9YTW6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2aA0A0J9YTW6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2aA0A0J9YTW6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn2aA0A0J9YTW6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn2aA0A0J9YTW6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn2aA0A0J9YTW6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 Gm10232-201ENSMUST00000089221 720 ntBASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn2aA0A0J9YTW6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.73■□□□□ 0.75
Scn2aA0A0J9YTW6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2aA0A0J9YTW6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn2aA0A0J9YTW6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2aA0A0J9YTW6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.72■□□□□ 0.75
Scn2aA0A0J9YTW6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn2aA0A0J9YTW6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Gm15820-201ENSMUST00000201566 728 ntBASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn2aA0A0J9YTW6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn2aA0A0J9YTW6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn2aA0A0J9YTW6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn2aA0A0J9YTW6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn2aA0A0J9YTW6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn2aA0A0J9YTW6 Gm14117-201ENSMUST00000122417 843 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms