Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.83■□□□□ 0.93
Tcrg-V3A0A0G2JEW2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tcrg-V3A0A0G2JEW2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.75■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Rps24-207ENSMUST00000224568 714 ntBASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.71■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Gm9959-201ENSMUST00000068277 390 ntBASIC20.71■□□□□ 0.91
Tcrg-V3A0A0G2JEW2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms