Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav9-4A0A0B4J1K2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav9-4A0A0B4J1K2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-4A0A0B4J1K2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-4A0A0B4J1K2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav9-4A0A0B4J1K2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-4A0A0B4J1K2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-4A0A0B4J1K2 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.02■□□□□ 0.16
Trav9-4A0A0B4J1K2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-4A0A0B4J1K2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-4A0A0B4J1K2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav9-4A0A0B4J1K2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm5921-201ENSMUST00000075898 882 ntBASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-4A0A0B4J1K2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9-4A0A0B4J1K2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9-4A0A0B4J1K2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 262.7 ms