Protein–RNA interactions for Protein: A0A0A6YXJ1

Gm3952, Predicted gene 3952 (Fragment), mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3952A0A0A6YXJ1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3952A0A0A6YXJ1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3952A0A0A6YXJ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3952A0A0A6YXJ1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm3952A0A0A6YXJ1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Gm3952A0A0A6YXJ1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3952A0A0A6YXJ1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3952A0A0A6YXJ1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3952A0A0A6YXJ1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3952A0A0A6YXJ1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3952A0A0A6YXJ1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm14117-201ENSMUST00000122417 843 ntBASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3952A0A0A6YXJ1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm3952A0A0A6YXJ1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3952A0A0A6YXJ1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3952A0A0A6YXJ1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3952A0A0A6YXJ1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3952A0A0A6YXJ1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.63■□□□□ 0.89
Gm3952A0A0A6YXJ1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3952A0A0A6YXJ1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3952A0A0A6YXJ1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Etf1-202ENSMUST00000180351 108 ntBASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3952A0A0A6YXJ1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gm3952A0A0A6YXJ1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3952A0A0A6YXJ1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3952A0A0A6YXJ1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3952A0A0A6YXJ1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.6■□□□□ 0.89
Gm3952A0A0A6YXJ1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3952A0A0A6YXJ1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3952A0A0A6YXJ1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3952A0A0A6YXJ1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3952A0A0A6YXJ1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Gm3952A0A0A6YXJ1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm3952A0A0A6YXJ1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3952A0A0A6YXJ1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3952A0A0A6YXJ1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3952A0A0A6YXJ1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.57■□□□□ 0.88
Gm3952A0A0A6YXJ1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3952A0A0A6YXJ1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms