Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv23A0A0A6YWQ1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm45364-201ENSMUST00000210883 159 ntBASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm9812-201ENSMUST00000061934 968 ntBASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 1122.1 ms