Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv23A0A0A6YWQ1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv23A0A0A6YWQ1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv23A0A0A6YWQ1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm45364-201ENSMUST00000210883 159 ntBASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv23A0A0A6YWQ1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv23A0A0A6YWQ1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Gm9812-201ENSMUST00000061934 968 ntBASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv23A0A0A6YWQ1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv23A0A0A6YWQ1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv23A0A0A6YWQ1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv23A0A0A6YWQ1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv23A0A0A6YWQ1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv23A0A0A6YWQ1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv23A0A0A6YWQ1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms