Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav3-4A0A075B654 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav3-4A0A075B654 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-4A0A075B654 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-4A0A075B654 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav3-4A0A075B654 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav3-4A0A075B654 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav3-4A0A075B654 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Trav3-4A0A075B654 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav3-4A0A075B654 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav3-4A0A075B654 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav3-4A0A075B654 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.33□□□□□ -0.11
Trav3-4A0A075B654 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav3-4A0A075B654 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-4A0A075B654 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav3-4A0A075B654 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-4A0A075B654 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-4A0A075B654 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav3-4A0A075B654 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav3-4A0A075B654 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav3-4A0A075B654 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Gm14121-201ENSMUST00000121441 1380 ntBASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms