Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav10A0A075B642 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.99■□□□□ 0.63
Trav10A0A075B642 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav10A0A075B642 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.96■□□□□ 0.63
Trav10A0A075B642 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.95■□□□□ 0.62
Trav10A0A075B642 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.91■□□□□ 0.62
Trav10A0A075B642 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav10A0A075B642 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms