Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trav10A0A075B642 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav10A0A075B642 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav10A0A075B642 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav10A0A075B642 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav10A0A075B642 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.99■□□□□ 0.63
Trav10A0A075B642 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav10A0A075B642 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.98■□□□□ 0.63
Trav10A0A075B642 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav10A0A075B642 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav10A0A075B642 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.96■□□□□ 0.63
Trav10A0A075B642 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trav10A0A075B642 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.95■□□□□ 0.62
Trav10A0A075B642 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trav10A0A075B642 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav10A0A075B642 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav10A0A075B642 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav10A0A075B642 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav10A0A075B642 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.91■□□□□ 0.62
Trav10A0A075B642 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav10A0A075B642 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms