Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav9n-4A0A075B631 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Scarna2-201ENSMUST00000157560 414 ntBASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9n-4A0A075B631 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-4A0A075B631 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Gm9806-201ENSMUST00000051080 552 ntBASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-4A0A075B631 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9n-4A0A075B631 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9n-4A0A075B631 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Gm16437-201ENSMUST00000025669 507 ntBASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-4A0A075B631 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-4A0A075B631 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-4A0A075B631 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Gm11687-201ENSMUST00000118911 886 ntBASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-4A0A075B631 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.54□□□□□ -0.08
Trav9n-4A0A075B631 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9n-4A0A075B631 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms