Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav5-1A0A075B5Z7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trav5-1A0A075B5Z7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav5-1A0A075B5Z7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav5-1A0A075B5Z7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav5-1A0A075B5Z7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5-1A0A075B5Z7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav5-1A0A075B5Z7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5-1A0A075B5Z7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav5-1A0A075B5Z7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5-1A0A075B5Z7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5-1A0A075B5Z7 Rps24-207ENSMUST00000224568 714 ntBASIC18.45■□□□□ 0.54
Trav5-1A0A075B5Z7 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.45■□□□□ 0.54
Trav5-1A0A075B5Z7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav5-1A0A075B5Z7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5-1A0A075B5Z7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5-1A0A075B5Z7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trav5-1A0A075B5Z7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5-1A0A075B5Z7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav5-1A0A075B5Z7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav5-1A0A075B5Z7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav5-1A0A075B5Z7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.42■□□□□ 0.54
Trav5-1A0A075B5Z7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5-1A0A075B5Z7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5-1A0A075B5Z7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav5-1A0A075B5Z7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.41■□□□□ 0.54
Trav5-1A0A075B5Z7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav5-1A0A075B5Z7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav5-1A0A075B5Z7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav5-1A0A075B5Z7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms