Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn3Q9DCB1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn3Q9DCB1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hmgn3Q9DCB1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn3Q9DCB1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn3Q9DCB1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Hmgn3Q9DCB1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Hmgn3Q9DCB1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hmgn3Q9DCB1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn3Q9DCB1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn3Q9DCB1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn3Q9DCB1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn3Q9DCB1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.23■□□□□ 0.83
Hmgn3Q9DCB1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn3Q9DCB1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn3Q9DCB1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hmgn3Q9DCB1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn3Q9DCB1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn3Q9DCB1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmgn3Q9DCB1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hmgn3Q9DCB1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn3Q9DCB1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn3Q9DCB1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn3Q9DCB1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmgn3Q9DCB1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmgn3Q9DCB1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.18■□□□□ 0.82
Hmgn3Q9DCB1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hmgn3Q9DCB1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmgn3Q9DCB1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hmgn3Q9DCB1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hmgn3Q9DCB1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.13■□□□□ 0.81
Hmgn3Q9DCB1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms