Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf138Q9CQE0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf138Q9CQE0 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rnf138Q9CQE0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf138Q9CQE0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.52■□□□□ 0.88
Rnf138Q9CQE0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.52■□□□□ 0.88
Rnf138Q9CQE0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf138Q9CQE0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf138Q9CQE0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
Rnf138Q9CQE0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf138Q9CQE0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf138Q9CQE0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf138Q9CQE0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf138Q9CQE0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf138Q9CQE0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf138Q9CQE0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rnf138Q9CQE0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf138Q9CQE0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf138Q9CQE0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf138Q9CQE0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf138Q9CQE0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf138Q9CQE0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.47■□□□□ 0.87
Rnf138Q9CQE0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf138Q9CQE0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf138Q9CQE0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf138Q9CQE0 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.45■□□□□ 0.86
Rnf138Q9CQE0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Rnf138Q9CQE0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf138Q9CQE0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf138Q9CQE0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf138Q9CQE0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Rps24-207ENSMUST00000224568 714 ntBASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf138Q9CQE0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.42■□□□□ 0.86
Rnf138Q9CQE0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf138Q9CQE0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms