Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Thumpd1Q99J36 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.27■□□□□ 0.67
Thumpd1Q99J36 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Terc-201ENSMUST00000082862 423 ntBASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Thumpd1Q99J36 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.25■□□□□ 0.67
Thumpd1Q99J36 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Mir3960-201ENSMUST00000198213 73 ntBASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Thumpd1Q99J36 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Thumpd1Q99J36 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Thumpd1Q99J36 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Thumpd1Q99J36 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd1Q99J36 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Thumpd1Q99J36 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd1Q99J36 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Thumpd1Q99J36 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Thumpd1Q99J36 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.19■□□□□ 0.66
Thumpd1Q99J36 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Thumpd1Q99J36 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Thumpd1Q99J36 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd1Q99J36 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Thumpd1Q99J36 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Thumpd1Q99J36 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Thumpd1Q99J36 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Thumpd1Q99J36 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.14■□□□□ 0.65
Thumpd1Q99J36 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Thumpd1Q99J36 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Thumpd1Q99J36 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms