Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col20a1Q923P0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col20a1Q923P0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Col20a1Q923P0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Col20a1Q923P0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col20a1Q923P0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col20a1Q923P0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col20a1Q923P0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.74■■□□□ 1.71
Col20a1Q923P0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col20a1Q923P0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.73■■□□□ 1.71
Col20a1Q923P0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col20a1Q923P0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col20a1Q923P0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col20a1Q923P0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col20a1Q923P0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col20a1Q923P0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.71■■□□□ 1.71
Col20a1Q923P0 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.71■■□□□ 1.71
Col20a1Q923P0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
Col20a1Q923P0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col20a1Q923P0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col20a1Q923P0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Col20a1Q923P0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col20a1Q923P0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Col20a1Q923P0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Etf1-202ENSMUST00000180351 108 ntBASIC25.69■■□□□ 1.7
Col20a1Q923P0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.69■■□□□ 1.7
Col20a1Q923P0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Col20a1Q923P0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col20a1Q923P0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Col20a1Q923P0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col20a1Q923P0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
Col20a1Q923P0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Col20a1Q923P0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col20a1Q923P0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Col20a1Q923P0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col20a1Q923P0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col20a1Q923P0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col20a1Q923P0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col20a1Q923P0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.64■■□□□ 1.7
Col20a1Q923P0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Col20a1Q923P0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Col20a1Q923P0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Col20a1Q923P0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Col20a1Q923P0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Col20a1Q923P0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col20a1Q923P0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.63■■□□□ 1.69
Col20a1Q923P0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col20a1Q923P0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.63■■□□□ 1.69
Col20a1Q923P0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Col20a1Q923P0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.63■■□□□ 1.69
Col20a1Q923P0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col20a1Q923P0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.63■■□□□ 1.69
Col20a1Q923P0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.63■■□□□ 1.69
Col20a1Q923P0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col20a1Q923P0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col20a1Q923P0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Col20a1Q923P0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.62■■□□□ 1.69
Col20a1Q923P0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col20a1Q923P0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Col20a1Q923P0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Col20a1Q923P0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col20a1Q923P0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col20a1Q923P0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Col20a1Q923P0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.59■■□□□ 1.69
Col20a1Q923P0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Col20a1Q923P0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col20a1Q923P0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col20a1Q923P0 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.58■■□□□ 1.69
Col20a1Q923P0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms