Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cspg4Q8VHY0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cspg4Q8VHY0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cspg4Q8VHY0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cspg4Q8VHY0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Gm40881-201ENSMUST00000223397 166 ntBASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cspg4Q8VHY0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.86■□□□□ 0.61
Cspg4Q8VHY0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cspg4Q8VHY0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Gm5874-201ENSMUST00000096101 508 ntBASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cspg4Q8VHY0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cspg4Q8VHY0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cspg4Q8VHY0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cspg4Q8VHY0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cspg4Q8VHY0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cspg4Q8VHY0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cspg4Q8VHY0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cspg4Q8VHY0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cspg4Q8VHY0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cspg4Q8VHY0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cspg4Q8VHY0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cspg4Q8VHY0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.79■□□□□ 0.6
Cspg4Q8VHY0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cspg4Q8VHY0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg4Q8VHY0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg4Q8VHY0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg4Q8VHY0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cspg4Q8VHY0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.77■□□□□ 0.59
Cspg4Q8VHY0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.77■□□□□ 0.59
Cspg4Q8VHY0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Cspg4Q8VHY0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cspg4Q8VHY0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms