Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4aQ8VEJ9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4aQ8VEJ9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps4aQ8VEJ9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
Vps4aQ8VEJ9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.77■□□□□ 0.92
Vps4aQ8VEJ9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4aQ8VEJ9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4aQ8VEJ9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps4aQ8VEJ9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vps4aQ8VEJ9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps4aQ8VEJ9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vps4aQ8VEJ9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Vps4aQ8VEJ9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4aQ8VEJ9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vps4aQ8VEJ9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps4aQ8VEJ9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps4aQ8VEJ9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps4aQ8VEJ9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps4aQ8VEJ9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Vps4aQ8VEJ9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps4aQ8VEJ9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps4aQ8VEJ9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4aQ8VEJ9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps4aQ8VEJ9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4aQ8VEJ9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4aQ8VEJ9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps4aQ8VEJ9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4aQ8VEJ9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps4aQ8VEJ9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vps4aQ8VEJ9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4aQ8VEJ9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Vps4aQ8VEJ9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Vps4aQ8VEJ9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Vps4aQ8VEJ9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vps4aQ8VEJ9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms